Detecting Local Haplotype Sharing and Haplotype Association

نویسندگان
چکیده

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Detecting Local Haplotype Sharing and Haplotype Association

A novel haplotype association method is presented, and its power is demonstrated. Relying on a statistical model for linkage disequilibrium (LD), the method first infers ancestral haplotypes and their loadings at each marker for each individual. The loadings are then used to quantify local haplotype sharing between individuals at each marker. A statistical model was developed to link the local ...

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OBJECTIVE Genetic association studies based on haplotypes are powerful in the discovery and characterization of the genetic basis of complex human diseases. However, statistical methods for detecting haplotype-haplotype and haplotype-environment interactions have not yet been fully developed owing to the difficulties encountered: large numbers of potential haplotypes and unknown haplotype pairs...

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Cross Haplotype Sharing Statistic: Haplotype length based method for whole genome association testing

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ژورنال

عنوان ژورنال: Genetics

سال: 2014

ISSN: 1943-2631

DOI: 10.1534/genetics.114.164814